Monday, May 22, 2017

Unraveling the Mysteries of Mischievous Microbiome

Science explains why some people smell worse than others despite keeping themselves squeaky clean.


  
The body is crawling with microbes that have evolved with the person, depending on the innate metabolism, history of infections, microbiome swaps, diet and lifestyle. The body's ecosystem of microorganisms can increase the risk for dangerous diseases for which we have unreserved levels of sympathy. It can also lead to ​unlikable conditions such as unpredictable and embarrassing outbursts of odor emitting through the pores - odor so bad it ruins social lives and careers.

Monday, May 8, 2017

Let those who never smelled bad cast the first stone

Analysis of our metabolism is crucial to comprehending the responses of our genes and microbes to the stresses of daily life, and to elucidating the causes and consequences of health and disease.

We applied metabolomic approach to an elusive condition that has always evaded diagnosis: socially and psychologically distressing odors that occur without a known or apparent cause. Learn about our preliminary results and participate in our anonymous survey to help us better understand and help with this condition.

Friday, March 31, 2017

Giving the underserved the care they deserve

Nobody likes strong smells coming from other human beings. It's just that social convention: you are nice, if you smell nice, and you are a monster - like Shakespeare's Caliban - if you smell bad.

But it could be the brunt of the genetic or environmental misfortune



Sunday, June 12, 2016

Seeing Through the Skin

by AURAMETRIX

REFERENCES


Andreoni G, Standoli CE, & Perego P (2016). Defining Requirements and Related Methods for Designing Sensorized Garments. Sensors (Basel, Switzerland), 16 (6) PMID: 27240361

Gao W, Emaminejad S, Nyein HY, Challa S, Chen K, Peck A, Fahad HM, Ota H, Shiraki H, Kiriya D, Lien DH, Brooks GA, Davis RW, & Javey A (2016). Fully integrated wearable sensor arrays for multiplexed in situ perspiration analysis. Nature, 529 (7587), 509-14 PMID: 26819044

Imani S, Bandodkar AJ, Mohan AM, Kumar R, Yu S, Wang J, & Mercier PP (2016). A wearable chemical-electrophysiological hybrid biosensing system for real-time health and fitness monitoring. Nature communications, 7 PMID: 27212140

Lee H, Choi TK, Lee YB, Cho HR, Ghaffari R, Wang L, Choi HJ, Chung TD, Lu N, Hyeon T, Choi SH, & Kim DH (2016). A graphene-based electrochemical device with thermoresponsive microneedles for diabetes monitoring and therapy. Nature nanotechnology, 11 (6), 566-72 PMID: 26999482

Panneer Selvam A, Muthukumar S, Kamakoti V, & Prasad S (2016). A wearable biochemical sensor for monitoring alcohol consumption lifestyle through Ethyl glucuronide (EtG) detection in human sweat. Scientific reports, 6 PMID: 26996103
XXX

Yokota T, Zalar P, Kaltenbrunner M, Jinno H, Matsuhisa N, Kitanosako H, Tachibana Y, Yukita W, Koizumi M, & Someya T (2016). Ultraflexible organic photonic skin. Science advances, 2 (4) PMID: 27152354


Wednesday, March 25, 2015

The Smell of Stress and Fear

Can we recognize if people around us are stressed, anxious or fearful without observing their facial expressions, body language and actions or hearing their voice and messages? Can we understand if we are stressed ourselves without assessing our heart rate, blood pressure, noticing dry throat, sweating, drops or surges in energy? Yes, we can - by using our nose - as humans, too, recognize and transmit their emotions through chemical senses.

When we are stressed or panic we become more sensitive to odors (Buróna et al., 2015), ranking neutral odors as unpleasant (Krusemark et al, 2013). Chronic stress will actually dull the senses (Yuan & Slotnick, 2013), but that's another story.

When other people are stressed, we can feel it without seeing or hearing them. Numerous experiments showed that we can recognize emotions from sweat alone. We might not be able to tell why, but experience sympathy by smelling odors of those taking exams vs just exercising on a bike (Prehn-Kristensen et al 2009), become more cooperative when smelling hard work, more submissive when detecting that other people's health status prioritizes their needs, more fearful when detecting chemical clues coming from people watching horror movies (Zhou and Chen, 2009, de Groot et al., 2012) and exhibit risk taking behavior when detecting other people's anxieties (Haegler et al, 2010).

What is the exact chemistry of stress, anxiety and fear? We are getting close to deciphering it. Stress, for example, might be recognized by six biomarkers, including indole and 2-methyl-pentadecane (Turner et al, 2013) that are also indicators of COPD (Martinez-Lozano Sinues et al, 2014) and heart disease

Correlating chemicals to health and wellness conditions is not easy. Acetone in breath, for example, has attracted the interest of clinical researchers for more than 60 years. Several dozen independent studies using various techniques and methods showed that much more complex analysis is required with long-term measurements of various health and environmental indicators including diet, treatments and prior medical history (Dowlaty, Yoon, and Galassetti, 2013). Aurametrix provides an integrated platform for such analysis, but until we sift through all the data, if you are stressed out, just take a deep breath and relax. Inhale confidence, exhale doubt.


REFERENCES

Haegler, K., Zernecke, R., Kleemann, A., Albrecht, J., Pollatos, O., Brückmann, H., & Wiesmann, M. (2010). No fear no risk! Human risk behavior is affected by chemosensory anxiety signals Neuropsychologia, 48 (13), 3901-3908 DOI: 10.1016/j.neuropsychologia.2010.09.019

Prehn-Kristensen A, Wiesner C, Bergmann TO, Wolff S, Jansen O, Mehdorn HM, Ferstl R, & Pause BM (2009). Induction of empathy by the smell of anxiety. PloS one, 4 (6) PMID: 19551135

Dowlaty N, Yoon A, & Galassetti P (2013). Monitoring states of altered carbohydrate metabolism via breath analysis: are times ripe for transition from potential to reality? Current opinion in clinical nutrition and metabolic care, 16 (4), 466-72 PMID: 23739629

de Groot JH, Smeets MA, Kaldewaij A, Duijndam MJ, & Semin GR (2012). Chemosignals communicate human emotions. Psychological science, 23 (11), 1417-24 PMID: 23019141

Krusemark EA, Novak L, Gitelman D, Li W. (2013) When the sense of smell meets emotion: Anxiety-state-dependent olfactory processing and neural circuitry adaptation. Journal of Neuroscience. 33(39):15324 –15332.

Martinez-Lozano Sinues P, Meier L, Berchtold C, Ivanov M, Sievi N, Camen G, Kohler M, Zenobi R Department of Chemistry and Applied Biosciences, ETH Zurich, Zurich, Switzerland. Respiration; International Review of Thoracic Diseases [2014, 87(4):301-310] PMID: 25545545

Yuan TF, Slotnick BM. Roles of olfactory system dysfunction in depression. (2014) Prog Neuropsychopharmacol Biol Psychiatry. 54:26-30. doi: 10.1016/j.pnpbp.2014.05.013. 

Saturday, September 7, 2013

Body Odor and Skin Bacteria

Our bodies are rainforests of microbes feeding off the leftovers from our meals and contributing to a variety of body odors. 

Human skin is inhabited and re-populated depending on health conditions, age, genetics, diet, the weather and climate zones, occupations, cosmetics, soaps, hygienic products and moisturizers. All these factors contribute to the variation in the types of microbes. Population of viruses, for example, can include a mixture of good ones - like bacteriophages fighting acne-causing Propionibacterium  - and bad ones  - as highly contagious Mesles. Bacterial communities include thousands of species of Actinobacteria, Bacteroidetes, Cyanobacteria, Proteobacteria, and fungi Malassezia.
Nat Rev Microbiol. 2011 April; 9(4): 244–253.
Nat Rev Microbiol. 2011 April; 9(4): 244–253.
These microbes form communities and have active social lives, cooperating to our good and bad experiences. They converse chemically - in many specific dialects and in universal Esperanto-like languages some of which even we could listen to  - by sampling and understanding smells. 
Humans are among the smelliest animals. And very capable in telling smells apart,  even if the only difference in two molecules is that their structures are mirror images of one another. But unlike dogs that appreciate a garbage bin as much as we appreciate the smell of fresh flowers, we don't properly interpret smells and like to complain about body odors. As we don't know all that much about chemical nature of our surroundings and rely on context and psychological factors, like feeling an intrusion in our experiences of the world. 

Maybe we have something to learn from the science of smells? 

In  a recent review of axillary microbiota, German researchers gave a good lesson in organic chemistry, listing major chemicals, enzymes and microbes responsible for body odor. Let's take a look. 

As was also shown in previous studies, Staphylococcus and Corynebacterium spp. are the most abundant organisms colonizing moist areas and emitting chicken-sulfury, onion-like and clary-sage like odors. The strain of Staphylococcus haemolyticus is producing some of the most offensive sulfury smells. Corynebacterium jeikeium K411 is another species that can compete on the strength of the odor. 

The major odor-causing substances are sulphanyl alkanols, steroid derivatives and short volatile branched-chain fatty acids. 

Most common sulphanyl alkanol in human sweat, 3-methyl-3-sulfanylhexan-1-ol is produced by bacteria in several ways, particularly in glutathione biodetoxification pathway, from molecules synthesized after consuming proteins (due to aminoacids L-cysteine, L-glutamic acid and glycin). This chemical,  besides being a major descriptor of human sweat odor,  is also present in beers. Its S-enantiomer (75%) is described as a classical body odor (sweat) with onion-like tones. Interestingly, the opposite enantiomer, (R)-3-methyl-3-sulfanylhexan-1-ol, is fruity and grapefruit-like. 

Another set of molecules produced by Corinebacterium are most prominent in Caucasian men and some Asians. The odor is hircine - resembling of goats with fatty and cheesy notes or cumin-spice like. The food sources contributing to this odor are proteins and animal fats. 

Pheromones androstenol and androstenone, metabolites of sexual hormones, are also odorous. The latter is especially interesting as to some of us it smells like vanilla while to others is smells like urine.

Sweaty-feet and cheesy smelling isovaleric and propionic acids and sour-vinegary acetic acid are also adding to the spectrum of human odors.  They can smell different to different people too - some people have genetic makeup making them hypersensitive to these smells, but others are much more tolerant and forgiving. The food sources of sourish smells are protein-rich. Lactic acid is found in cheeses, yogurt, soy sauce, sourdough, meats and pickled vegetables. It can be also produced from the breakdown of carbohydrates during exercise and used as additional fuel. Glycerol is created from triglycerides found in fats and oils.  


So next time you are exposed to body odor, try to understand what could be causing it. It is not easy as it is a combination of many factors such as hormonal fluctuations, mental or physical stress, metabolism and microbes. It could be perfectly normal or result from a medical condition of the person who has the smell and your own olfactory abilities. But the smells are fascinating clues to health and  the basics can be learned by most everyone.
REFERENCES

Fredrich E, Barzantny H, Brune I, & Tauch A (2013). Daily battle against body odor: towards the activity of the axillary microbiota. Trends in microbiology, 21 (6), 305-12 PMID: 23566668

Grice EA, & Segre JA (2012). The human microbiome: our second genome. Annual review of genomics and human genetics, 13, 151-70 PMID: 22703178

Stevenson, R., & Repacholi, B. (2005). Does the source of an interpersonal odour affect disgust? A disease risk model and its alternatives. European Journal of Social Psychology, 35 (3), 375-401 DOI: 10.1002/ejsp.263

Troccaz M, Starkenmann C, Niclass Y, van de Waal M, Clark AJ.  ( 2004) 3-Methyl-3-sulfanylhexan-1-ol as a major descriptor for the human axilla-sweat odour profile.Chem Biodivers. 2004 Jul;1(7):1022-35. PMID: 17191896

Lenochová P, Vohnoutová P, Roberts SC, Oberzaucher E, Grammer K, Havlíček J (2012) Psychology of fragrance use: perception of individual odor and perfume blends reveals a mechanism for idiosyncratic effects on fragrance choice. (PMID:22470479) Free full text article  PLoS One [2012, 7(3):e33810]
Barzantny H, Brune I, Tauch A. (2012) Molecular basis of human body odour formation: insights deduced from corynebacterial genome sequences. Int J Cosmet Sci. 2012 Feb;34(1):2-11. doi: 10.1111/j.1468-2494.2011.00669.x. Epub 2011 Jul 25.  PMID: 21790661

Friday, June 28, 2013

I Know What You Ate This Summer

Despite active foodstagramming and foodteresting, and eagerness to show pictures of meals and diet reports to friends on social media, we don't really want others to know everything we eat. But they might know anyway.

Why worry about NSA, when Google, Facebook, Amazon and many others know what we might be eating. Cameras record our ways to groceries and restaurants, credit cards record our purchases, food chains know our weaknesses, clothes shops know how, as a result, our pant sizes change over time. One day phones will know what we ate too.  As both short- and long-term diets change our breath-prints - creating signature metabolites in exhaled breath.

A recent Dutch study actually looked at what gluten-free eating does to our breath. Just 4 week of dieting lead to remarkable - though reversible -  differences. (As detected in 20 healthy individuals by gas chromatography coupled with mass spectrometry (TD-GC-tof-MS) in combination with chemometric analysis ). A set of twelve volatile compounds that distinguish gluten-free eaters along with information from Aurametrix knowledgebase is listed in the table below.


Compound Odor Notes
2-butanol strong alcoholic 1-Butanol smells like permanent marker (Sharpie) 
octane Gasoline-like, car exhaust octyl chloride smells faintly of oranges
2-propyl-1 pentanol green banana 1-Pentanol smells like paint thinner 
nonanal strong fruity or floral attracts mosquitoes
dihydro-4-methyl-2(3H)-furanone strong coconut aroma 5-butyl-4-methyloxolan-2-one is known as "whisky lactone"
nonanoic acid rancid beer, old cooking oil armpits of males over 30
dodecanal Soapy, waxy, aldehydic, citrus, orange rindy with floral nuances Pure, synthetic qualities of this fatty aldehyde are used in traces in perfumery for "fresh laundry"-like effects.


Reference
Baranska A, Tigchelaar E, Smolinska A, Dallinga JW, Moonen EJ, Dekens JA, Wijmenga C, Zhernakova A, & van Schooten FJ (2013). Profile of volatile organic compounds in exhaled breath changes as a result of gluten-free diet. Journal of breath research, 7 (3) PMID: 23774130